PHATRDRAFT_13261 at4g39970 t5j17_140 (PLN02779)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_13261 chr_11 at4g39970 t5j17_140 (PLN02779) 439827 440769 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0124

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0188
 0.15

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 42.7423 9.20E-06 107 - 209 superfamily 119389
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 42.7423 9.20E-06 107 - 209 superfamily 119389
PLN02779 haloacid dehalogenase-like hydrolase family protein cl19137 354.785 2.17E-123 1 - 238 specific 215416
HAD superfamily haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase. - 354.785 2.17E-123 1 - 238 superfamily 267490
COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] - 120.997 3.09E-33 1 - 233 multi-dom 223710

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33231 Not available 259729 216403 428568 Cre14.g623000.t1.1 AT4G39970.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments