PHATRDRAFT_17401 dihydrolipoamide s-acetyltransferase (e2 component of pyruvate dehydrogenase complex)isoform cra_a (PDHac_trf_mito)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17401 chr_1 dihydrolipoamide s-acetyltransferase (e2 component of pyruvate dehydrogenase complex)isoform cra_a... 775575 777140 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0194

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0229
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
lipoyl_domain Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-... cl11404 91.6971 1.11E-22 57 - 126 specific 133458
Biotinyl_lipoyl_domains superfamily Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the... - 91.6971 1.11E-22 57 - 126 superfamily 264355
2-oxoacid_dh superfamily 2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three... - 193.922 2.44E-58 279 - 492 superfamily 249671
2-oxoacid_dh superfamily 2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three... - 193.922 2.44E-58 279 - 492 superfamily 249671
E3_binding superfamily e3 binding domain; This family represents a small domain of the E2 subunit of 2-oxo-acid... - 53.5817 2.01E-09 190 - 226 superfamily 251550
E3_binding superfamily e3 binding domain; This family represents a small domain of the E2 subunit of 2-oxo-acid... - 53.5817 2.01E-09 190 - 226 superfamily 251550
PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; This model represents... - 394.926 5.44E-133 54 - 492 multi-dom 233367

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268280 Not available 170993 195095 Not available Cre09.g386735.t1.1 AT1G54220.2 562723

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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