PHATRDRAFT_44055 23s rrna (uracil-5-)-methyltransferase (meth_trns_rumB)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44055	chr_3	23s rrna (uracil-5-)-methyltransferase (meth_trns_rumB)	832029	833456	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0201

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0255	0.14	750 160

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	49.8672	5.07E-07	284 - 470	superfamily	266528
meth_trns_rumB		23S rRNA (uracil-5-)-methyltransferase RumB; This family consists of RNA methyltransferases...	-	56.0009	7.57E-09	91 - 469	multi-dom	131140

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23812		Not available	178867	227071	Not available	Not available	AT3G27180.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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