PHATRDRAFT_8810 topoisomeraseiii beta (TopA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_8810 chr_1 topoisomeraseiii beta (TopA) 1754283 1757066 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0124

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0146
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TOP1Ac superfamily DNA Topoisomerase, subtype IA; DNA-binding, ATP-binding and catalytic domain of bacterial DNA... - 336.884 6.77E-107 178 - 601 superfamily 238110
TOP1Ac superfamily DNA Topoisomerase, subtype IA; DNA-binding, ATP-binding and catalytic domain of bacterial DNA... - 336.884 6.77E-107 178 - 601 superfamily 238110
TOPRIM_TopoIA_TopoIII TOPRIM_TopoIA_TopoIII: The topoisomerase-primase (TORPIM) domain found in members of the type IA... cl00718 133.898 7.34E-36 2 - 172 specific 173782
TOPRIM superfamily Topoisomerase-primase domain. This is a nucleotidyl transferase/hydrolase domain found in type IA,... - 133.898 7.34E-36 2 - 172 superfamily 260587
TopA Topoisomerase IA [DNA replication, recombination, and repair] - 417.779 3.04E-135 2 - 610 multi-dom 223624

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25879 Not available Not available 239343 74124 Cre17.g725100.t1.2 AT2G32000.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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