10002 Solute_trans_a superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10002	chr_14	Solute_trans_a superfamily	957716	961125	+	Solute_trans_a superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441847	Thaps10002.4, Thaps10002.3, Thaps10002.2, Thaps10002.1, Thaps10002.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0082

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0134	0.26	5300 4900

Most Highly Correlated Transcripts

bd439 (bd439) POLBc_alpha 0.9279	7942 hypothetical protein 0.9165	1217 (Tp_Myb1R2) SANT_TRF 0.9132	bd843 (bd843) NA 0.9131	bd529 (bd529) SNF2_N 0.9104	bd1983 (bd1983) RecA-like_NTPases superfamily 0.9087
263366 Pkinase 0.9038	7967 2A0106 0.9029	bd1214 (bd1214) KISc_C_terminal 0.9027	29304 (TUB1) PLN00221 0.8963

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Solute_trans_a superfamily		Organic solute transporter Ostalpha; This family is a transmembrane organic solute transport...	-	225.506	4.41E-67	308 - 653	superfamily	252064

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_10293	PHATR_10293	179554	245561	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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