10156 Tcp10_C superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10156 chr_15 Tcp10_C superfamily 419228 422896 + Tcp10_C superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442007 Thaps10156.1, Thaps10156.2, Thaps10156.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0241
 0.29

Most Highly Correlated Transcripts

bd1214

(bd1214) KISc_C_terminal
0.9736

bd843

(bd843) NA
0.9619

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9615

bd439

(bd439) POLBc_alpha
0.9575

bd950

(bd950) NA
0.9511

20903

CAF1A
0.9418

bd529

(bd529) SNF2_N
0.9401

bd1081

(bd1081) NA
0.9366

4808

hypothetical protein
0.9357

4688

hypothetical protein
0.9297

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Tcp10_C superfamily T-complex protein 10 C-terminus; This family represents the C-terminus (approximately 180 residues... - 131.479 2.11E-34 1040 - 1155 superfamily 191698

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45511 PHATRDRAFT_45511 247810 287783 225017 Not available Not available 484413

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003910 -

GO:0003910

DNA ligase (ATP) activity

Details: 
Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m).
GO Category: 
MF

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