10363 SETThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10363	chr_16a	SET	141416	143102	+	SET

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449977	Thaps10363.4, Thaps10363.3, Thaps10363.2, Thaps10363.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0418

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0103	0.42	29 19

Most Highly Correlated Transcripts

bd690 (bd690) NA 0.9816	bd1934 (bd1934) NA 0.9356	bd415 (bd415) arom_aa_hydroxylase superfamily 0.9233	bd1801 (bd1801) NA 0.9158	bd738 (bd738) NA 0.9147	bd643 (bd643) NA 0.9073
bd877 (bd877) NA 0.8949	bd737 (bd737) NA 0.8945	bd1840 (bd1840) NA 0.894	bd1946 (bd1946) NA 0.887

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SET		SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be...	cl02566	60.2047	3.01E-11	132 - 265	specific	250181
SET superfamily		SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be...	-	60.2047	3.01E-11	132 - 265	superfamily	261347

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
37549		Not available	203932	162739	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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