10744 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10744 chr_17 hypothetical protein 580358 583301 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7453093 Thaps10744.2, Thaps10744.1, Thaps10744.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0125

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0038
 0.59

Most Highly Correlated Transcripts

7842

(Tp_AP2-EREBP11) regulator [Rayko]
0.8123

11074

Bestrophin superfamily
0.8079

10331

hypothetical protein
0.8015

12076

EPL1 superfamily
0.7972

264903

(CHT1_1) GH18_chitinase-like superfamily
0.785

7885

HP_PGM_like
0.7736

9258

HP_PGM_like
0.7673

3553

hypothetical protein
0.7669

12120

NADB_Rossmann superfamily
0.766

8409

hypothetical protein
0.7655

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0006306 GO:0008170 GO:0004812 GO:0005524 GO:0006418 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006306

DNA methylation

Details: 
The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
GO Category: 
BP

GO:0008170

N-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule.
GO Category: 
MF

GO:0004812

aminoacyl-tRNA ligase activity

Details: 
Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006418

tRNA aminoacylation for protein translation

Details: 
The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO Category: 
BP

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