12120 NADB_Rossmann superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
12120	chr_23	NADB_Rossmann superfamily	435350	436686	+	NADB_Rossmann superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448914	Thaps12120.1, Thaps12120.2, Thaps12120.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0051	0.39	0.0021 3.2

Most Highly Correlated Transcripts

4843 (FCP2) hypothetical protein 0.8445	22747 (Lhcr10) fucoxanthin chlorophyll a/c light-harvesting protein 0.8444	6947 PLN00158 0.8345	10280 hypothetical protein 0.8331	4882 (Lhcr4) fucoxanthin chl a/c light-harvesting protein 0.8302	9258 HP_PGM_like 0.829
270233 hypothetical protein 0.8218	32586 hppA 0.8164	270221 hypothetical protein 0.8149	4883 (Lhcr14) fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type 0.7995

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	132.78	6.87E-36	31 - 310	superfamily	263925

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_47077	PHATRDRAFT_47077	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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