10860 Methyltransf_21Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10860	chr_18	Methyltransf_21	314775	316081	-	Methyltransf_21

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442964	Thaps10860.1, Thaps10860.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0399

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0035	0.44

Most Highly Correlated Transcripts

4064 NADB_Rossmann superfamily 0.9264	268257 fabG 0.9205	36764 PRK05279 0.9191	30701 PRK05279 0.9158	1684 Ion_trans_2 0.9143	39726 NrfG 0.906
268652 ATG11 superfamily 0.906	262501 hypothetical protein 0.9051	269705 hypothetical protein 0.9035	35693 SIR2 superfamily 0.9

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Methyltransf_21		Methyltransferase FkbM domain; This family has members from bacteria to human, and appears to be a...	cl17387	68.1008	1.06E-13	177 - 356	specific	252973
Methyltransf_21 superfamily		Methyltransferase FkbM domain; This family has members from bacteria to human, and appears to be a...	-	68.1008	1.06E-13	177 - 356	superfamily	266660

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	111321	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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