11189 Fucokinase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11189 chr_19a_19 Fucokinase 383345 386665 + Fucokinase

Synonyms

NCBI ID Ensembl Genomes exon ID
7446311 Thaps11189.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0172

Most Highly Correlated Transcripts

263431

Ptr
0.8589

268266

KBL_like
0.856

11998

hypothetical protein
0.8534

3354

hypothetical protein
0.8494

921

hypothetical protein
0.848

16295

FBPase
0.8474

268868

(ERCC2) rad3
0.8473

269937

M1_APN_2
0.8472

2593

ANK
0.8447

7937

CHD
0.8445

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Fucokinase L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated by L-... - 124.946 2.11E-30 141 - 616 multi-dom 254543
COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only] - 80.1146 2.56E-16 713 - 1021 multi-dom 225325

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25629 PHATRDRAFT_bd1431 PHATRDRAFT_bd1431 232262 298690 453358 Not available AT1G01220.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0005524 GO:0016301 GO:0016310 GO:0005737 GO:0008152 GO:0016773 GO:0050201 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016301

kinase activity

Details: 
Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
GO Category: 
MF

GO:0016310

phosphorylation

Details: 
The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
GO Category: 
BP

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016773

phosphotransferase activity, alcohol group as acceptor

Details: 
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
GO Category: 
MF

GO:0050201

fucokinase activity

Details: 
Catalysis of the reaction: L-fucose + ATP = beta-L-fucose 1-phosphate + ADP + 2 H(+).
GO Category: 
MF

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