33312 NnrU superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
33312	chr_4	NnrU superfamily	739533	740687	+	NnrU superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447505	Thaps33312.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0420

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0045	0.44

Most Highly Correlated Transcripts

bd1806 (bd1806) AAT_I superfamily 0.8934	9115 DnaJ 0.8668	11842 sigpep_I_bact 0.8473	36995 LplA 0.8439	bd1877 (bd1877) NA 0.8405	264834 HA 0.839
36649 SufE superfamily 0.839	19158 GRX_PICOT_like 0.8364	11229 COG1272 0.8354	261823 FIG superfamily 0.8345

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NnrU superfamily		NnrU protein; This family consists of several plant and bacterial NnrU proteins. NnrU is thought to...	-	133.804	1.06E-36	137 - 343	superfamily	266783

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_16955	PHATRDRAFT_16955	161271	295993	458464	Cre19.g750247.t1.1	AT1G10830.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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