11687 t_SNARE
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11687 chr_22 t_SNARE 124774 126352 + t_SNARE

Synonyms

NCBI ID Ensembl Genomes exon ID
7443672 Thaps11687.1, Thaps11687.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0418

Most Highly Correlated Transcripts

270222

0.9008

11664

DUF3510
0.8767

25619

hypothetical protein
0.8752

5778

hypothetical protein
0.8648

25451

AAA superfamily
0.864

24685

Glyco_tranf_GTA_type superfamily
0.8574

11617

hypothetical protein
0.8573

1249

hypothetical protein
0.8561

5869

hypothetical protein
0.8559

11441

hypothetical protein
0.8559

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
t_SNARE Soluble NSF (N-ethylmaleimide-sensitive fusion protein)-Attachment protein (SNAP) REceptor domain;... cl00152 59.0462 2.94E-11 373 - 431 specific 238115
t_SNARE superfamily Soluble NSF (N-ethylmaleimide-sensitive fusion protein)-Attachment protein (SNAP) REceptor domain;... - 59.0462 2.94E-11 373 - 431 superfamily 260219

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 239780 Not available 435615 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004420 GO:0009058 -

GO:0004420

hydroxymethylglutaryl-CoA reductase (NADPH) activity

Details: 
Catalysis of the reaction: (R)-mevalonate + CoA + 2 NADP(+) = (S)-3-hydroxy-3-methylglutaryl-CoA + 2 H(+) + 2 NADPH.
GO Category: 
MF

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

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