11876 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11876 chr_22 hypothetical protein 718509 719833 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7448214 Thaps11876.2, Thaps11876.1, Thaps11876.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0160

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0012
 0.49

Most Highly Correlated Transcripts

33225

MYSc
0.9202

27435

PAH
0.9115

263191

PLN03076
0.9114

262826

DUF3608 superfamily
0.9061

4959

hypothetical protein
0.9017

8657

hypothetical protein
0.9016

262104

PI-PLCc_GDPD_SF superfamily
0.9008

12602

MYSc
0.9007

2958

PROCN
0.9003

31437

Peptidase_M16 superfamily
0.8989

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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