1230 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1230 chr_1 hypothetical protein 979347 981469 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7447598 Thaps1230.1, Thaps1230.2, Thaps1230.4, Thaps1230.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0087

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0057
 0.46

Most Highly Correlated Transcripts

2910

Motor_domain superfamily
0.874

34590

nt_trans superfamily
0.841

24333

hypothetical protein
0.8393

23561

hypothetical protein
0.8343

33513

CYCLIN
0.8313

bd529

(bd529) SNF2_N
0.8307

7942

hypothetical protein
0.8287

2122

GIY-YIG_SLX1
0.8272

4512

hypothetical protein
0.8253

263366

Pkinase
0.8251

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 273190 296155 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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