1303 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1303 chr_1 WD40 superfamily 1170835 1174327 + WD40 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451419 Thaps1303.1, Thaps1303.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0335

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0073
 0.47

Most Highly Correlated Transcripts

21622

CBS_pair superfamily
0.8598

10581

Peptidase_C54 superfamily
0.8534

3163

SET
0.8469

12836

EEP superfamily
0.8359

8762

SNF2_N
0.835

bd923

(bd923) NA
0.8318

11941

hypothetical protein
0.825

268872

SET
0.822

24515

hypothetical protein
0.819

9649

hypothetical protein
0.8179

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 92.7832 1.79E-20 751 - 1036 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 74.3547 5.92E-14 589 - 1029 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre06.g276100.t1.2 AT3G15470.1 316661

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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