13556 BglCThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
13556	chr_2	BglC	1219298	1221747	+	BglC

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444677	Thaps13556.5, Thaps13556.4, Thaps13556.6, Thaps13556.2, Thaps13556.3, Thaps13556.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0127

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0031	0.36	0.00007 15000

Most Highly Correlated Transcripts

21893 CysPc 0.8914	264344 PDEase_I 0.8889	9330 hypothetical protein 0.888	25315 hypothetical protein 0.8814	11594 DUF2042 superfamily 0.8767	34191 CobN_like 0.8735
25162 hypothetical protein 0.8732	5393 hypothetical protein 0.8729	263997 (APA1) Adaptin_N 0.872	27813 Hid1 superfamily 0.8712

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
BglC		Endoglucanase [Carbohydrate transport and metabolism]	-	84.8441	6.99E-18	35 - 491	multi-dom	225344

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_1372	PHATRDRAFT_1372	228981	251407	438171	Not available	Not available	562400

KEGG

KEGG description	KEGG Pathway
Starch and sucrose metabolism	map00500

GO Terms

GO:0004338 -

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