1357 FKBP_C
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1357 chr_1 FKBP_C 1316143 1317198 - FKBP_C

Synonyms

NCBI ID Ensembl Genomes exon ID
7451516 Thaps1357.2, Thaps1357.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0091
 0.31

Most Highly Correlated Transcripts

7838

hypothetical protein
0.9124

20625

DUF4602
0.8957

20960

hypothetical protein
0.8953

25365

hypothetical protein
0.894

5806

TIM_phosphate_binding superfamily
0.8935

2392

hypothetical protein
0.893

4517

hypothetical protein
0.8917

20930

DRE_TIM_metallolyase superfamily
0.8877

21959

hypothetical protein
0.8871

bd930

(bd930) HA
0.8866

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase. cl19519 88.0669 3.62E-22 191 - 272 specific 249719
FKBP_C superfamily FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase. - 88.0669 3.62E-22 191 - 272 superfamily 267872

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 180430 295002 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 GO:0003700 GO:0006355 GO:0000287 GO:0008152 GO:0016462 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0000287

magnesium ion binding

Details: 
Interacting selectively and non-covalently with magnesium (Mg) ions.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016462

pyrophosphatase activity

Details: 
Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments.
GO Category: 
MF

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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