13877 vWFA superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
13877 chr_15 vWFA superfamily 449200 451450 + vWFA superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449490 Thaps13877.3, Thaps13877.2, Thaps13877.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0456

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0027
 0.38

Most Highly Correlated Transcripts

270222

0.8794

13065

(CAT1_2) Carn_acyltransf superfamily
0.8168

4116

hypothetical protein
0.8118

bd1803

(bd1803) NA
0.8112

22971

hypothetical protein
0.8034

36443

Peptidase_C14
0.8032

bd1821

(bd1821) NA
0.8015

16607

PcbC
0.7967

bd1891

(bd1891) COG3899
0.7908

25675

LRR_RI superfamily
0.7815

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
C2B_Copine C2 domain second repeat in Copine; There are 2 copies of the C2 domain present in copine, a protein... cl14603 123.445 3.33E-33 146 - 237 specific 176012
C2 superfamily C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... - 123.445 3.33E-33 146 - 237 superfamily 265430
vWFA superfamily Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von... - 233.418 1.77E-71 278 - 503 superfamily 260163

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40747 PHATRDRAFT_8678 PHATRDRAFT_8678 236135 199885 Not available Cre03.g170150.t1.1 AT1G08860.1 334425

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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