1526 SEC14Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1526	chr_1	SEC14	1764044	1765273	+	SEC14

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443103	Thaps1526.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0319

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0093	0.41	0.084 1.8

Most Highly Correlated Transcripts

38258 ATM1 0.8915	4517 hypothetical protein 0.8796	13308 PLN02948 0.8767	268443 SAICAR_synt_Sc 0.8759	267979 HCO3_cotransp superfamily 0.8727	5197 hypothetical protein 0.8663
22593 hypothetical protein 0.8549	23677 hypothetical protein 0.8532	5907 hypothetical protein 0.8528	2622 hypothetical protein 0.852

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SEC14		Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae...	cl15787	87.0554	1.52E-20	192 - 323	specific	238099
SEC14 superfamily		Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae...	-	87.0554	1.52E-20	192 - 323	superfamily	265785

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44766	PHATRDRAFT_44766	181440	245753	Not available	Not available	AT1G72150.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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