1568 SRPBCC superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1568 chr_1 SRPBCC superfamily 1861827 1862972 + SRPBCC superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443130 Thaps1568.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0474

Most Highly Correlated Transcripts

267979

HCO3_cotransp superfamily
0.9092

6997

hypothetical protein
0.9086

35531

SET
0.8942

20771

hypothetical protein
0.8913

11563

hypothetical protein
0.8896

39592

(NRT3) 2A0108
0.8879

25306

hypothetical protein
0.8868

5856

Na_Ca_ex
0.8813

bd721

(bd721) NA
0.879

37609

PKc_like superfamily
0.8777

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SRPBCC superfamily START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily; SRPBCC domains... - 100.452 6.50E-25 76 - 341 superfamily 265438

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47841 PHATRDRAFT_47841 261484 225703 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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