16304 ribokinase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16304 chr_1 ribokinase 829680 831676 + ribokinase

Synonyms

NCBI ID Ensembl Genomes exon ID
7453466 Thaps16304.3, Thaps16304.1, Thaps16304.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0005

Most Highly Correlated Transcripts

270222

0.978

260936

HCO3_cotransp superfamily
0.8586

34635

hypothetical protein
0.8442

8067

Na_Ca_ex
0.8378

8509

hypothetical protein
0.8333

261357

NAD_binding_8 superfamily
0.8281

263007

hypothetical protein
0.8256

21620

AAT_I superfamily
0.8249

9262

hypothetical protein
0.8228

30149

Solute_trans_a
0.8193

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction... cl00192 322.577 2.10E-105 56 - 379 specific 238579
ribokinase_pfkB_like superfamily ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including... - 322.577 2.10E-105 56 - 379 superfamily 260247
HAM1 NTPase/HAM1. This family consists of the HAM1 protein and pyrophosphate-releasing xanthosine/... cl00276 227.789 1.47E-70 414 - 604 specific 238285
Maf_Ham1 superfamily Maf_Ham1. Maf, a nucleotide binding protein, has been implicated in inhibition of septum formation... - 227.789 1.47E-70 414 - 604 superfamily 260318

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_10546 PHATR_10546 186913 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004747 GO:0006014 -

GO:0004747

ribokinase activity

Details: 
Catalysis of the reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate.
GO Category: 
MF

GO:0006014

D-ribose metabolic process

Details: 
The chemical reactions and pathways involving D-ribose (ribo-pentose). As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.
GO Category: 
BP

Add comment

Log in to post comments