1666 Tic22 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1666 chr_1 Tic22 superfamily 2117116 2118207 + Tic22 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445691 Thaps1666.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0059

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0156
 0.33

Most Highly Correlated Transcripts

bd218

(bd218) Chloroa_b-bind superfamily
0.9267

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9184

bd1023

(bd1023) atpD
0.9168

bd1318

(bd1318) atpF
0.9158

bd1474

(bd1474) phytoene_desat
0.9128

270372

hypothetical protein
0.91

bd598

(bd598) atpG
0.9087

bd1306

(bd1306) NA
0.908

bd1765

(bd1765) NA
0.9075

bd672

(bd672) NA
0.9072

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Tic22 superfamily Tic22-like family; The preprotein translocation at the inner envelope membrane of chloroplasts so... - 77.1016 1.52E-16 80 - 331 superfamily 262170

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_54197 PHATR_54197 277093 321275 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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