16842 (SAT1) CysE
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16842 chr_19a_19 (SAT1) CysE 75154 76824 - CysE

Synonyms

NCBI ID Ensembl Genomes exon ID
7442633 Thaps16842.1, Thaps16842.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0313

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0005
 0.39

Most Highly Correlated Transcripts

bd705

(bd705) SPX
0.866

bd706

(bd706) NA
0.7832

25470

hypothetical protein
0.7405

35373

AarF
0.7071

10873

NA
0.6952

32704

PKc_like superfamily
0.6732

260805

SRP54_euk
0.673

38743

S_TKc
0.6706

261614

SPRY_RanBP_like
0.6571

bd803

(bd803) RimI
0.6543

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LbH_SAT Serine acetyltransferase (SAT): SAT catalyzes the CoA-dependent acetylation of the side chain... cl00160 169.158 2.99E-50 137 - 237 specific 100045
LbetaH superfamily Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each... - 169.158 2.99E-50 137 - 237 superfamily 260227
SATase_N superfamily Serine acetyltransferase, N-terminal; The N-terminal domain of serine acetyltransferase has a... - 62.5568 6.46E-12 6 - 100 superfamily 262653
CysE Serine acetyltransferase [Amino acid transport and metabolism] - 247.226 1.67E-78 64 - 248 multi-dom 223975

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 231316 Not available 55024 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0005737 GO:0006535 GO:0009001 -

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0006535

cysteine biosynthetic process from serine

Details: 
The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine.
GO Category: 
BP

GO:0009001

serine O-acetyltransferase activity

Details: 
Catalysis of the reaction: L-serine + acetyl-CoA = O-acetyl-L-serine + CoA.
GO Category: 
MF

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