33343 (PGD1) PLN02350
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33343 chr_4 (PGD1) PLN02350 1222360 1223833 - PLN02350

Synonyms

NCBI ID Ensembl Genomes exon ID
7446099 Thaps33343.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0213

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0054
 0.44

Most Highly Correlated Transcripts

17214

PLN02512
0.9096

31829

CBS_like
0.901

268592

VDE superfamily
0.8859

31169

PRX_BCP
0.8796

23818

hypothetical protein
0.8781

bd1893

(bd1893) NA
0.876

36037

Trypsin_2
0.8714

261608

PLN02585
0.863

20405

GRX_GRXh_1_2_like
0.8623

38608

SDR_a5
0.8607

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
6PGD superfamily 6-phosphogluconate dehydrogenase, C-terminal domain; This family represents the C-terminal all-... - 487.816 1.47E-171 180 - 473 superfamily 249826
6PGD superfamily 6-phosphogluconate dehydrogenase, C-terminal domain; This family represents the C-terminal all-... - 487.816 1.47E-171 180 - 473 superfamily 249826
NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase; The NAD binding domain of 6-... cl19126 181.111 3.51E-54 4 - 176 specific 251959
F420_oxidored superfamily NADP oxidoreductase coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent. - 181.111 3.51E-54 4 - 176 superfamily 267479
PLN02350 phosphogluconate dehydrogenase (decarboxylating) - 924.886 0 1 - 487 multi-dom 215200

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13356 PHATRDRAFT_13356 211512 320180 Not available Cre12.g526800.t1.2 AT3G02360.1 557596

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004616 GO:0006098 -

GO:0004616

phosphogluconate dehydrogenase (decarboxylating) activity

Details: 
Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+.
GO Category: 
MF

GO:0006098

pentose-phosphate shunt

Details: 
The process in which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses.
GO Category: 
BP

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