1738 S14_ClpP_2Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1738	chr_1	S14_ClpP_2	2299166	2300175	-	S14_ClpP_2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453416	Thaps1738.3, Thaps1738.2, Thaps1738.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0029

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0225	0.26	0.0012 59000

Most Highly Correlated Transcripts

bd1820 (bd1820) Fasciclin 0.9411	bd1306 (bd1306) NA 0.9398	bd1765 (bd1765) NA 0.9367	bd624 (bd624) Glyco_transf_34 superfamily 0.9351	bd218 (bd218) Chloroa_b-bind superfamily 0.9349	bd208 (bd208) DUF3529 0.9341
bd1863 (bd1863) NA 0.9331	bd1160 (bd1160) Chloroa_b-bind superfamily 0.9273	bd1387 (bd1387) psbE 0.9231	bd1078 (bd1078) NA 0.9175

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
S14_ClpP_2		Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease; Clp protease (...	cl15763	314.765	5.38E-109	72 - 242	specific	132928
Clp_protease_like superfamily		Caseinolytic protease (ClpP) is an ATP-dependent protease; Clp protease (caseinolytic protease;...	-	314.765	5.38E-109	72 - 242	superfamily	265774

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44382	PHATRDRAFT_44382	195023	185610	Not available	Cre12.g486100.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006508 GO:0008462 -

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