19764 MPC superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
19764	chr_4	MPC superfamily	1323469	1324308	+	MPC superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446116	Thaps19764.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0098

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0077	0.37	0.000000001 0.32

Most Highly Correlated Transcripts

19662 hypothetical protein 0.9184	6056 GCD2 0.8995	23728 WD40 superfamily 0.8987	5026 F1-ATPase_gamma 0.8965	32945 (SDH1) sdhB 0.8902	9028 hypothetical protein 0.8892
10521 hypothetical protein 0.889	1000 hypothetical protein 0.8842	33035 YGGT 0.8824	38647 REC 0.8801

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MPC superfamily		Uncharacterized protein family (UPF0041); Uncharacterized protein family (UPF0041).	-	76.4075	1.11E-17	86 - 173	superfamily	252085
MPC superfamily		Uncharacterized protein family (UPF0041); Uncharacterized protein family (UPF0041).	-	76.4075	1.11E-17	86 - 173	superfamily	252085

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	165963	Not available	Not available	Not available	AT5G20090.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005554 -

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