19899 Bromodomain superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
19899 chr_11a Bromodomain superfamily 372459 374645 - Bromodomain superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448310 Thaps19899.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0259

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0022
 0.44

Most Highly Correlated Transcripts

263786

(ZFP20) zf-TAZ
0.9216

263734

LRR_RI superfamily
0.9182

11434

hypothetical protein
0.9148

262645

Glyco_18
0.9148

bd875

(bd875) NA
0.9111

33225

MYSc
0.9057

35929

(MAPKKK) S_TKc
0.9055

991

PROCN superfamily
0.9047

263297

Glyco_18
0.9034

36563

MYSc
0.903

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Bromodomain superfamily Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone... - 150.943 4.86E-43 424 - 514 superfamily 261339
zf-TAZ TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... cl02660 84.3375 1.42E-19 192 - 264 specific 251111
zf-TAZ superfamily TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... - 84.3375 1.42E-19 192 - 264 superfamily 261396

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45764 PHATRDRAFT_45764 168758 247266 430817 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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