20016 FKBP_CThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20016	chr_8	FKBP_C	768245	768529	-	FKBP_C

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452832	Thaps20016.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0176

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0024	0.39

Most Highly Correlated Transcripts

270222 0.9136	31113 Cyt_c_Oxidase_VIb 0.9021	7874 hypothetical protein 0.892	11848 hypothetical protein 0.8793	23414 hypothetical protein 0.8777	37642 nascent-polypeptide-associated complex alpha polypeptide-like protein 0.8777
37962 LSm3 0.8768	33348 IGPD superfamily 0.875	38616 FRQ1 0.8748	4680 hypothetical protein 0.8737

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FKBP_C		FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase.	cl19519	66.4958	1.18E-15	18 - 84	specific	249719
FKBP_C superfamily		FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase.	-	66.4958	1.18E-15	18 - 84	superfamily	267872

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	242388	309592	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

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