2017 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2017 chr_1 HA 2960383 2962255 - HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7445472 Thaps2017.1, Thaps2017.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0397

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9847

9275

hypothetical protein
0.9282

268232

COG3899
0.9118

24660

hypothetical protein
0.9113

36372

S_TKc
0.9113

9503

PTZ00121
0.908

25288

Sec6 superfamily
0.9038

8500

PRP38 superfamily
0.9025

39741

(APM3) AP-3_Mu3_Cterm
0.9023

10487

hypothetical protein
0.9021

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 60.3969 1.90E-11 458 - 516 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 60.3969 1.90E-11 458 - 516 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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