39741 (APM3) AP-3_Mu3_Cterm
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39741 chr_2 (APM3) AP-3_Mu3_Cterm 2525726 2527533 + AP-3_Mu3_Cterm

Synonyms

NCBI ID Ensembl Genomes exon ID
7450488 Thaps39741.3, Thaps39741.1, Thaps39741.4, Thaps39741.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0247

Most Highly Correlated Transcripts

270029

(cul1) Cullin
0.9252

28004

hypothetical protein
0.9203

267979

HCO3_cotransp superfamily
0.9191

15822

WD40 superfamily
0.9148

23602

hypothetical protein
0.9142

31822

WD40
0.9138

16114

PLN02350
0.9138

40200

TRX_reduct
0.9115

38469

WD40
0.9106

21464

BTB
0.9097

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AP-3_Mu3_Cterm C-terminal domain of medium Mu3 subunit in adaptor protein (AP) complex AP-3; AP complexes... cl10970 304.51 1.34E-100 231 - 475 specific 211363
AP_MHD_Cterm superfamily C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD); This... - 304.51 1.34E-100 231 - 475 superfamily 264154

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_18241 PHATRDRAFT_18241 187653 8893 Not available Not available AT1G56590.1 485001

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006886 GO:0030125 -

GO:0006886

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GO:0030125

clathrin vesicle coat

Details: 
A clathrin coat found on a vesicle.
GO Category: 
CC

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