20571 Membrane-FADS-like superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
20571 chr_1 Membrane-FADS-like superfamily 79131 80520 - Membrane-FADS-like superfamily
NCBI ID Ensembl Genomes exon ID
7445488 Thaps20571.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0251
Aldolase_II superfamily
0.9117
(bd1221) recQ_fam
0.9069
(bd719) NA
0.8738
PRK09427
0.8699
PTZ00132
0.8545
hypothetical protein
0.8501
Acatn superfamily
0.849
Peptidase_S28 superfamily
0.8459
hypothetical protein
0.8452
TCP1_alpha
0.845
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Membrane-FADS-like superfamily The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane... - 84.5297 1.57E-19 166 - 224 superfamily 260534
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 271050 Not available 196284 Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0004768 GO:0005506 GO:0005783 GO:0006633 GO:0016020 GO:0016491 -

stearoyl-CoA 9-desaturase activity

Details: 
Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O.
GO Category: 
MF

iron ion binding

Details: 
Interacting selectively and non-covalently with iron (Fe) ions.
GO Category: 
MF

endoplasmic reticulum

Details: 
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO Category: 
CC

fatty acid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO Category: 
BP

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF
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