20715 Evr1_Alr superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20715	chr_1	Evr1_Alr superfamily	932684	934387	-	Evr1_Alr superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445636	Thaps20715.2, Thaps20715.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0377

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0291	0.48	30000 2800

Most Highly Correlated Transcripts

267979 HCO3_cotransp superfamily 0.8819	268443 SAICAR_synt_Sc 0.8739	19158 GRX_PICOT_like 0.8628	2332 PTZ00340 0.8613	4372 hypothetical protein 0.8526	40200 TRX_reduct 0.8524
36007 Aldolase_II superfamily 0.8504	6640 hypothetical protein 0.8469	12899 AAA 0.8462	2426 MviM 0.8446

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Evr1_Alr superfamily		Erv1 / Alr family; Biogenesis of Fe/S clusters involves a number of essential mitochondrial...	-	61.1746	1.07E-11	263 - 369	superfamily	261180

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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