20788 Diphthine_synthase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20788 chr_1 Diphthine_synthase 1284205 1285289 - Diphthine_synthase

Synonyms

NCBI ID Ensembl Genomes exon ID
7451548 Thaps20788.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0272
 0.25

Most Highly Correlated Transcripts

bd1876

(bd1876) NatB_MDM20 superfamily
0.9587

268688

hypothetical protein
0.8796

263424

PLN02551
0.8713

268048

MFS
0.8688

27873

PLN02274
0.8667

bd1515

(bd1515) Adenylsuccinate_lyase_2
0.8665

1374

RRM
0.864

268678

(Tp_Myb2R3) ZUO1
0.8609

15424

hypothetical protein
0.8592

23175

hypothetical protein
0.8549

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Diphthine_synthase Diphthine synthase, also known as DPH5; Diphthine synthase, also known as diphthamide biosynthesis... cl00304 371.83 6.85E-130 2 - 256 specific 212506
TP_methylase superfamily S-AdoMet dependent tetrapyrrole methylases; This family uses S-AdoMet (S-adenosyl-L-methionine or... - 371.83 6.85E-130 2 - 256 superfamily 260339

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_5236 PHATRDRAFT_5236 186536 194415 236620 Cre05.g233300.t1.2 AT4G31790.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0008168 GO:0004164 GO:0017183 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0008168

methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to an acceptor molecule.
GO Category: 
MF

GO:0004164

diphthine synthase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + 2-(3-carboxy-3-aminopropyl)-L-histidine = S-adenosyl-L-homocysteine + 2-(3-carboxy-3-(methylammonio)propyl)-L-histidine.
GO Category: 
MF

GO:0017183

peptidyl-diphthamide biosynthetic process from peptidyl-histidine

Details: 
The modification of peptidyl-histidine to 2'-(3-carboxamido-3-(trimethylammonio)propyl)-L-histidine, known as diphthamide, found in translation elongation factor eEF-2.
GO Category: 
BP

Add comment

Log in to post comments