20891 Cyt_b561_FRRS1_likeThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20891	chr_1	Cyt_b561_FRRS1_like	1865792	1867693	-	Cyt_b561_FRRS1_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443131	Thaps20891.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0097

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0282	0.29	12000 20000

Most Highly Correlated Transcripts

25838 hypothetical protein 0.9679	23757 hypothetical protein 0.9643	5439 hypothetical protein 0.9473	8273 hypothetical protein 0.9409	bd1670 (bd1670) SUL1 0.9358	25038 hypothetical protein 0.9338
7900 SCP superfamily 0.9324	11048 hypothetical protein 0.9282	3424 hypothetical protein 0.9282	11817 hypothetical protein 0.9161

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cyt_b561_FRRS1_like		Eukaryotic cytochrome b(561), including the FRRS1 gene product; Cytochrome b(561), as found in...	cl14616	71.607	2.18E-14	298 - 457	specific	176490
Cyt_b561 superfamily		Eukaryotic cytochrome b(561); Cytochrome b(561) is a family of endosomal or secretory vesicle-...	-	71.607	2.18E-14	298 - 457	superfamily	265434

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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