20954 (Tp_CXC3) TCR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20954 chr_1 (Tp_CXC3) TCR 2190768 2193828 + TCR

Synonyms

NCBI ID Ensembl Genomes exon ID
7445534 Thaps20954.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0079

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0290
 0.30

Most Highly Correlated Transcripts

4808

hypothetical protein
0.945

263798

incenp-like protein
0.9373

33955

Pkinase
0.9357

23522

DUF1032 superfamily
0.934

4041

HEC1
0.9328

4688

hypothetical protein
0.9313

36441

CYCLIN
0.9271

1908

hypothetical protein
0.9266

10156

Tcp10_C superfamily
0.9255

4729

Glycos_transf_1 superfamily
0.9224

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TCR superfamily Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two... - 59.1962 7.24E-11 313 - 354 superfamily 202712
TCR superfamily Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two... - 59.1962 7.24E-11 313 - 354 superfamily 202712
TCR superfamily Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two... - 59.1962 7.24E-11 313 - 354 superfamily 202712
TCR superfamily Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two... - 59.1962 7.24E-11 313 - 354 superfamily 202712

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd1374 PHATRDRAFT_bd1374 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments