20986 WcaG
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20986 chr_1 WcaG 2385580 2389324 - WcaG

Synonyms

NCBI ID Ensembl Genomes exon ID
7445247 Thaps20986.2, Thaps20986.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0079

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0213
 0.25

Most Highly Correlated Transcripts

bd950

(bd950) NA
0.9463

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9446

4729

Glycos_transf_1 superfamily
0.9348

bd439

(bd439) POLBc_alpha
0.9335

bd843

(bd843) NA
0.9245

bd951

(bd951) NA
0.9174

33955

Pkinase
0.9167

2267

hypothetical protein
0.9163

1196

hypothetical protein
0.9161

8536

CDC6
0.9146

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate... - 66.119 1.24E-11 571 - 807 multi-dom 223528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0003711 GO:0006355 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0003711

NA

Details: 
NA
GO Category: 
NA

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

Add comment

Log in to post comments