21131 Voltage_gated_ClC superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21131 chr_2 Voltage_gated_ClC superfamily 285824 286922 - Voltage_gated_ClC superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442214 Thaps21131.2, Thaps21131.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0458

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0045
 0.44

Most Highly Correlated Transcripts

32098

PTZ00063
0.8654

263997

(APA1) Adaptin_N
0.834

35745

Peptidase_C13 superfamily
0.8288

bd1161

(bd1161) NA
0.8257

bd858

(bd858) COG3899
0.8223

10270

hypothetical protein
0.82

14028

Sugar_tr
0.8142

263994

Adaptin_N
0.8139

21257

hypothetical protein
0.8133

262675

AAA
0.8098

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Voltage_gated_ClC superfamily CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl-... - 65.663 2.96E-12 105 - 313 superfamily 261508

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 234317 320992 124694 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004812 GO:0005524 GO:0006418 -

GO:0004812

aminoacyl-tRNA ligase activity

Details: 
Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006418

tRNA aminoacylation for protein translation

Details: 
The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO Category: 
BP

Add comment

Log in to post comments