263994 Adaptin_N
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263994 chr_13 Adaptin_N 386172 389131 + Adaptin_N

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0177

Most Highly Correlated Transcripts

263997

(APA1) Adaptin_N
0.9659

bd392

(bd392) DEXDc
0.9206

8535

hypothetical protein
0.913

2581

hypothetical protein
0.9122

25677

MgtE superfamily
0.9084

10881

hypothetical protein
0.9022

41687

(APB1) Adaptin_N
0.9012

22907

hypothetical protein
0.9006

263663

RPE65
0.8976

33072

Sec1
0.8967

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Alpha_adaptin_C superfamily Alpha adaptin AP2, C-terminal domain; Alpha adaptin is a hetero tetramer which regulates clathrin-... - 88.9144 1.26E-20 831 - 930 superfamily 251207
Adaptin_N Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and... - 308.768 4.71E-94 26 - 601 multi-dom 250737

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 256733 Not available Not available AT5G22770.2 321395

KEGG

KEGG description KEGG Pathway
Endocytosis map04144

GO Terms

GO:0006461 GO:0006886 GO:0030130 -

GO:0006461

protein complex assembly

Details: 
The aggregation, arrangement and bonding together of a set of components to form a protein complex.
GO Category: 
BP

GO:0006886

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GO:0030130

clathrin coat of trans-Golgi network vesicle

Details: 
A clathrin coat found on a vesicle of the trans-Golgi network.
GO Category: 
CC

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