21165 (Tp_TAF9) TAF9
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
21165 chr_2 (Tp_TAF9) TAF9 421054 422743 - TAF9
NCBI ID Ensembl Genomes exon ID
7442242 Thaps21165.1
Expression Profile Conditional Changes Cluster Dendrogram
hypothetical protein
hypothetical protein
hypothetical protein
(bd789) ABC_ATPase superfamily
hypothetical protein
hypothetical protein
Peptidase_C19 superfamily
COG2 superfamily
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TAF9 TATA Binding Protein (TBP) Associated Factor 9 (TAF9) is one of several TAFs that bind TBP and is... cl17378 105.777 4.72E-27 295 - 420 specific 173963
TAF9 superfamily TATA Binding Protein (TBP) Associated Factor 9 (TAF9) is one of several TAFs that bind TBP and is... - 105.777 4.72E-27 295 - 420 superfamily 247932
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44797 PHATRDRAFT_44797 264183 157552 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0005669 GO:0006352 GO:0003677 -

transcription factor TFIID complex

A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters.
GO Category: 

DNA-templated transcription, initiation

Any process involved in the assembly of the RNA polymerase preinitiation complex (PIC) at the core promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. The initiation phase ends just before and does not include promoter clearance, or release, which is the transition between the initiation and elongation phases of transcription.
GO Category: 

DNA binding

Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
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