2119 LNS2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2119 chr_2 LNS2 superfamily 217494 219603 - LNS2 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452179 Thaps2119.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0147

Most Highly Correlated Transcripts

2580

AarF
0.9191

268825

COG5647
0.9026

25272

Atg14
0.8999

25509

hypothetical protein
0.895

4565

hypothetical protein
0.8947

9861

DUF563
0.8906

21220

KU superfamily
0.8885

12836

EEP superfamily
0.8876

1101

hypothetical protein
0.8875

34590

nt_trans superfamily
0.8858

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LNS2 superfamily LNS2 (Lipin/Ned1/Smp2); This domain is found in Saccharomyces cerevisiae protein SMP2, proteins... - 88.0978 4.15E-20 298 - 527 superfamily 267711

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43773 PHATRDRAFT_43773 161649 257461 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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