21290 (AGPR) PRK11863
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21290 chr_2 (AGPR) PRK11863 1070838 1072404 + PRK11863

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0200

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0078
 0.42

Most Highly Correlated Transcripts

1432

hypothetical protein
0.8647

bd1944

(bd1944) Glyco_hydro_79n superfamily
0.8226

bd1109

(bd1109) NA
0.8088

261823

FIG superfamily
0.7914

21710

Pho88 superfamily
0.7847

40233

(Tp_CSF3) CSP_CDS
0.7835

22293

PLN00178
0.7762

31424

(AAT2) Aminotran_1_2
0.7758

4462

hypothetical protein
0.766

21258

DUF3523
0.7631

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Semialdhyde_dh superfamily Semialdehyde dehydrogenase, NAD binding domain; The semialdehyde dehydrogenase family is found in N... - 77.9739 7.98E-18 43 - 136 superfamily 214863
Semialdhyde_dh superfamily Semialdehyde dehydrogenase, NAD binding domain; The semialdehyde dehydrogenase family is found in N... - 77.9739 7.98E-18 43 - 136 superfamily 214863
PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional - 549.379 0 41 - 357 multi-dom 237004

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
6056 PHATR_36913 PHATR_36913 275170 322645 434425 Cre03.g146187.t1.1 AT2G19940.2 358351

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0003942 GO:0006526 GO:0005737 -

GO:0003942

N-acetyl-gamma-glutamyl-phosphate reductase activity

Details: 
Catalysis of the reaction: N-acetyl-L-glutamate 5-semialdehyde + NADP+ + phosphate = N-acetyl-5-glutamyl phosphate + NADPH + H+.
GO Category: 
MF

GO:0006526

arginine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
GO Category: 
BP

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

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