21258 DUF3523
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21258 chr_2 DUF3523 892405 894491 + DUF3523

Synonyms

NCBI ID Ensembl Genomes exon ID
7450245 Thaps21258.4, Thaps21258.3, Thaps21258.2, Thaps21258.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0291

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0279
 0.39

Most Highly Correlated Transcripts

270365

hypothetical protein
0.9282

22293

PLN00178
0.9021

31810

pyruv_kin
0.8954

bd1828

(bd1828) NA
0.8836

40233

(Tp_CSF3) CSP_CDS
0.8806

42612

pdxS
0.8758

269371

hypothetical protein
0.8737

263424

PLN02551
0.8685

22770

PLN02908
0.8668

32140

DHDPS
0.866

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 68.3267 1.28E-13 330 - 463 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 68.3267 1.28E-13 330 - 463 superfamily 267297
DUF3523 Domain of unknown function (DUF3523); This presumed domain is functionally uncharacterized. This... - 239.681 3.51E-74 15 - 271 multi-dom 256812

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44478 PHATRDRAFT_44478 210521 233200 Not available Cre03.g144967.t1.1 AT5G16930.1 556010

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000166 GO:0017111 GO:0005524 GO:0016817 -

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016817

hydrolase activity, acting on acid anhydrides

Details: 
Catalysis of the hydrolysis of any acid anhydride.
GO Category: 
MF

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