21593 Trichoplein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21593 chr_3 Trichoplein 85106 90453 + Trichoplein

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0306

Most Highly Correlated Transcripts

263610

COG3899
0.8979

24063

COG3899
0.8889

263599

COG3899
0.8882

269586

hypothetical protein
0.8799

25879

TopA
0.8681

bd780

(bd780) NA
0.8642

270222

0.8632

4047

hypothetical protein
0.8632

24331

(Tp_TAZ5_PHD3_ZZ3) KAT11 superfamily
0.8589

24852

hypothetical protein
0.858

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Trichoplein tumor suppressor, Mitostatin; Trichoplein or mitostatin, was first defined as a meiosis-specific... - 84.9635 1.03E-17 850 - 1171 multi-dom 258135

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_44138 PHATR_44138 193723 192809 221928 Cre03.g171900.t1.1 Not available 312592

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016855 GO:0005737 GO:0008929 GO:0019242 GO:0003910 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016855

racemase and epimerase activity, acting on amino acids and derivatives

Details: 
Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid.
GO Category: 
MF

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0008929

methylglyoxal synthase activity

Details: 
Catalysis of the reaction: glycerone phosphate = methylglyoxal + phosphate.
GO Category: 
MF

GO:0019242

methylglyoxal biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.
GO Category: 
BP

GO:0003910

DNA ligase (ATP) activity

Details: 
Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m).
GO Category: 
MF

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