2160 p23_hB-ind1_likeThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2160	chr_2	p23_hB-ind1_like	324375	325794	-	p23_hB-ind1_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442221	Thaps2160.5, Thaps2160.4, Thaps2160.3, Thaps2160.2, Thaps2160.1, Thaps2160.6

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0199

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0098	0.36	0.0005 0.0017

Most Highly Correlated Transcripts

37367 FKBP_C 0.8959	37934 GRX_PICOT_like 0.8953	24495 (Tp_CCHH26) regulator [Rayko] 0.8877	22673 NA 0.8851	35401 COG0523 0.8746	36037 Trypsin_2 0.8719
29506 cpn10 0.87	7886 hypothetical protein 0.8672	26991 GRX_GRXh_1_2_like 0.8643	16295 FBPase 0.8578

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
p23_hB-ind1_like		p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins. hB-...	cl00175	119.622	1.05E-33	62 - 171	specific	107222
alpha-crystallin-Hsps_p23-like superfamily		alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a...	-	119.622	1.05E-33	62 - 171	superfamily	260235

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_42757	PHATRDRAFT_42757	180242	182098	Not available	Cre07.g341550.t1.2	Not available	514860

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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