21612 PRK07206
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21612 chr_3 PRK07206 221292 224927 + PRK07206

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0241

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0083
 0.43

Most Highly Correlated Transcripts

35164

acolac_lg
0.8957

bd1945

(bd1945) NA
0.8915

27873

PLN02274
0.8551

268062

PRK14293
0.8435

bd190

(bd190) SrmB
0.837

20833

Methyltransf_16 superfamily
0.8196

31415

hypothetical protein
0.8173

28100

DHBP_synthase
0.8028

36406

Ribosomal_L7_archeal_euk
0.7999

268238

PRK05192
0.7998

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ATP-grasp_4 ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... cl17255 123.912 5.66E-32 620 - 801 specific 257854
ATP-grasp_4 superfamily ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... - 123.912 5.66E-32 620 - 801 superfamily 266590
ATP-grasp_4 ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... cl17255 123.912 5.66E-32 620 - 801 specific 257854
ATP-grasp_4 superfamily ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... - 123.912 5.66E-32 620 - 801 superfamily 266590
PRK07206 hypothetical protein; Provisional - 280.376 1.10E-84 507 - 922 multi-dom 180883
PRK07206 hypothetical protein; Provisional - 280.376 1.10E-84 507 - 922 multi-dom 180883

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_37283 PHATRDRAFT_37283 257495 22964 223094 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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