264773 ABCG_PDR_domain2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264773 chr_22 ABCG_PDR_domain2 190220 194199 + ABCG_PDR_domain2

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0006

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0137
 0.33

Most Highly Correlated Transcripts

2045

hypothetical protein
0.8809

21620

AAT_I superfamily
0.8696

22075

Hydrolase_like superfamily
0.8641

33685

(MCM1) PRK09426
0.8603

263848

Voltage_gated_ClC superfamily
0.8584

264361

pepN
0.8558

37662

ATPase-IIA1_Ca
0.8432

34514

PLN02539
0.8325

263653

P-ATPase-V
0.83

5807

hypothetical protein
0.8281

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCG_PDR_domain2 Second domain of the pleiotropic drug resistance-like (PDR) subfamily G of ATP-binding cassette... cl17201 290.299 1.52E-90 636 - 867 specific 213199
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 161.661 1.09E-44 3 - 230 superfamily 266551
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 161.661 1.09E-44 3 - 230 superfamily 266551
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 131.996 3.07E-34 963 - 1171 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 131.996 3.07E-34 963 - 1171 superfamily 266576
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 131.996 3.07E-34 963 - 1171 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 131.996 3.07E-34 963 - 1171 superfamily 266576
3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein; [Transport and binding proteins, Other]. - 227.622 2.21E-63 3 - 591 multi-dom 233207
SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] - 121.462 2.15E-30 654 - 861 multi-dom 224059

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_83 PHATRDRAFT_83 156127 242415 430521 Cre04.g224500.t1.1 AT4G15233.1 250541

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0016887 GO:0000166 GO:0017111 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

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