22008 Vps16_N superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22008 chr_3 Vps16_N superfamily 2210888 2214386 - Vps16_N superfamily
NCBI ID Ensembl Genomes exon ID
7452120 Thaps22008.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0409
Normalized Mean Residue
Thaps_bicluster_0243
0.36
RNB
0.8931
hypothetical protein
0.8853
hypothetical protein
0.878
hypothetical protein
0.8778
hypothetical protein
0.8765
hypothetical protein
0.8734
hypothetical protein
0.8719
(APA1) Adaptin_N
0.871
E1_like_apg7
0.871
hypothetical protein
0.8681
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Vps16_N superfamily Vps16, N-terminal region; This protein forms part of the Class C vacuolar protein sorting (Vps)... - 139.559 3.41E-35 467 - 663 superfamily 252829
Vps16_C superfamily Vps16, C-terminal region; This protein forms part of the Class C vacuolar protein sorting (Vps)... - 82.1368 5.50E-17 813 - 1163 superfamily 252828
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47275 PHATRDRAFT_47275 256967 296870 Not available Cre03.g199311.t1.1 AT2G38020.1 530775
KEGG description KEGG Pathway
Not available Not available
GO:0003824 GO:0008152 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP
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