22185 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
22185	chr_4	ANK	699390	704255	+	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452631	Thaps22185.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0245

Most Highly Correlated Transcripts

8762 SNF2_N 0.9176	24063 COG3899 0.9041	263610 COG3899 0.9002	3436 SLAC1 0.8927	263599 COG3899 0.888	34505 hypothetical protein 0.8866
1216 hypothetical protein 0.8801	20796 Sec23_helical 0.8777	8366 hypothetical protein 0.8744	4047 hypothetical protein 0.8714

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	66.6382	1.75E-12	969 - 1053	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	66.6382	1.75E-12	969 - 1053	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_46476	PHATRDRAFT_46476	241171	323516	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004672 GO:0005524 GO:0006468 GO:0004674 -

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