3436 SLAC1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3436 chr_3 SLAC1 961317 965210 + SLAC1

Synonyms

NCBI ID Ensembl Genomes exon ID
7448745 Thaps3436.5, Thaps3436.2, Thaps3436.3, Thaps3436.1, Thaps3436.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0247

Most Highly Correlated Transcripts

1079

hypothetical protein
0.9253

22843

hypothetical protein
0.9069

22764

hypothetical protein
0.9043

24618

hypothetical protein
0.902

1216

hypothetical protein
0.9016

21997

TPR_12
0.8963

5093

hypothetical protein
0.8957

21891

hypothetical protein
0.8955

4818

hypothetical protein
0.8954

6961

NIF superfamily
0.893

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SLAC1 Voltage-dependent anion channel; This family of transporters has ten alpha helical transmembrane... cl04176 64.1429 4.73E-11 730 - 1013 specific 252046
TDT superfamily The Tellurite-resistance/Dicarboxylate Transporter (TDT) family; The Tellurite-resistance/... - 64.1429 4.73E-11 730 - 1013 superfamily 262045

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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